Intragenomic reiterations detection using hidden Markov models
Identifieur interne : 007F87 ( Main/Exploration ); précédent : 007F86; suivant : 007F88Intragenomic reiterations detection using hidden Markov models
Auteurs : Sébastien Hergalant [France] ; Bertrand Aigle ; Bernard Decaris ; Pierre Leblond ; Jean-François Mari [France]Source :
English descriptors
- mix :
Abstract
We present a genomic data mining method in which the user describes a signal worked out by a second order HMM. This signal representing the probability to classify a nucleotidic residue or a group of residues in a particular state, allows the localization of repetitions in a complete bacterial genomic sequence.
Url:
Affiliations:
- France
- Grand Est, Lorraine (région)
- Nancy
- Institut national polytechnique de Lorraine, Université Nancy 2, Université de Lorraine
Links toward previous steps (curation, corpus...)
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Le document en format XML
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HMM. This signal representing the probability to classify a nucleotidic residue or a group of residues in a particular state, allows the localization of repetitions in a complete bacterial genomic sequence.</div></front></TEI><affiliations><list><country><li>France</li></country><region><li>Grand Est</li><li>Lorraine (région)</li></region><settlement><li>Nancy</li></settlement><orgName><li>Institut national polytechnique de Lorraine</li><li>Université Nancy 2</li><li>Université de Lorraine</li></orgName></list><tree><noCountry><name sortKey="Aigle, Bertrand" sort="Aigle, Bertrand" uniqKey="Aigle B" first="Bertrand" last="Aigle">Bertrand Aigle</name><name sortKey="Decaris, Bernard" sort="Decaris, Bernard" uniqKey="Decaris B" first="Bernard" last="Decaris">Bernard Decaris</name><name sortKey="Leblond, Pierre" sort="Leblond, Pierre" uniqKey="Leblond P" first="Pierre" last="Leblond">Pierre Leblond</name></noCountry><country name="France"><region name="Grand Est"><name sortKey="Hergalant, Sebastien" sort="Hergalant, Sebastien" uniqKey="Hergalant S" first="Sébastien" last="Hergalant">Sébastien Hergalant</name></region><name sortKey="Mari, Jean Francois" sort="Mari, Jean Francois" uniqKey="Mari J" first="Jean-François" last="Mari">Jean-François Mari</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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